Alignment of alleles: Chinese perch (Siniperca chuatsi) IGIV1S5 

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   I   V   L   T   Q   S   P   G   S   Q   S   V   V   P   G   Q   T   V   S
  AY013292,IGIV1S5*01           CAA ATC GTC CTG ACT CAG TCT CCT GGA TCT CAG TCT GTT GTT CCA GGA CAG ACT GTC TCT

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   R   C   K   T   S   T   G   V   G   N   Y                           L   H
  AY013292,IGIV1S5*01           CTC AGA TGT AAA ACC AGT ACA GGT GTT GGT AAC TAC ... ... ... ... ... ... CTC CAC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   L   Q   K   P   G   E   A   P   K   L   L   I   Y   R   G   T
  AY013292,IGIV1S5*01           TGG TAC CTT CAG AAA CCT GGA GAA GCT CCT AAA CTC CTG ATT TAT CGA GGT ACA ... ...

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     D   R   P   S   G   V   P       G   R   F   S   G   G   G
  AY013292,IGIV1S5*01           ... ... ... ... ... GAC CGT CCG TCT GGA GTT CCA ... GGT CGT TTT AGT GGA GGT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                         S   G   T   D   F   T   L   T   I   S   G   V   Q   V   G   D   S   G
  AY013292,IGIV1S5*01           ... ... TCT GGG ACT GAC TTC ACT CTG ACC ATC AGT GGA GTC CAG GTT GGA GAT TCA GGA

                                                CDR3-IMGT
                                101 102 103 104 105
                                 V   Y   Y   C   Q
  AY013292,IGIV1S5*01           GTT TAC TAC TGT CAG  #c
#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 01/10/2003
Author: Nathalie Bosc